David M. Miller

Sophia Shalhout

2021-08-26

Clinical Informatics · R/Medicine 2021

GENETEX

A GENomics Report TEXt Mining R Package and Shiny Application Designed to Capture Real-World Clinico-Genomic Data.

Clinical Informatics Natural Language Processing R Package Shiny

Event R/Medicine Conference

Date August 26, 2021

Location Virtual Forum

Overview

David M. Miller and Sophia Shalhout present an overview of GENETEX at the 2021 R/Medicine Conference.

GENETEX is an R package and Shiny application designed to capture real-world clinico-genomic data through text mining of genomics reports.

Watch the presentation Read the manuscript View code on GitHub

Related publication and software

A peer-reviewed manuscript describing GENETEX is available in JAMIA Open. The package code is available through The Miller Lab’s GitHub repository, and the presentation recording is hosted on the R/Medicine YouTube channel.

Presenters

David M. Miller and Sophia Shalhout.

This page describes a presentation at R/Medicine 2021. See the manuscript and software repository for further details. This site represents our opinions only. See our full Disclaimer and Terms of Use Agreement.